Publications 2012

Journals

  1. Identification and quantification of key microbial trophic groups of methanogenic glucose degradation in an anaerobic digester sludge
    Ito, T., Yoshiguchi, K., Ariesyady, H. D. and Okabe, S.
    Bioresource Technology, 2012, 123, 599-607.
  2. Anaerobic treatment of municipal wastewater at ambient temperature: Analysis of archaeal community structure and recovery of dissolved methane
    Bandara, W., Kindaichi, T., Satoh, H., Sasakawa, M., Nakahara, Y., Takahashi, M. and Okabe, S.
    Water Research, 2012, 46(17), 5756-5764.
  3. Occurrence of hand-foot-and-mouth disease pathogens in domestic sewage and secondary effluent in Xi’an, China
    Ji, Z., Wang, X., Zhang, C., Miura, T., Sano, D., Funamizu, N. and Okabe, S.
    Microbes and Environments, 2012, 27(3), 288-292.
  4. Community structure and in situ activity of nitrifying bacteria in Phragmites root-associated biofilms
    Okabe, S., Nakamura, Y. and Satoh, H.
    Microbes and Environments, 2012, 27(3), 242-249.
  5. Characterization of microbial community structures and their activities in single anaerobic granules by beta imaging, microsensors and fluorescence in situ hybridization
    Satoh H., Tsushima I., Miura Y., Ito T. and Okabe, S.
    Water Science and Technology, 2012, 65(12), 2125-2131.
  6. RelE-mediated dormancy is enhanced at high cell density in Escherichia coli
    Tashiro, Y., Kawata, K., Taniuchi, A., Kakinuma, K., May, T. and Okabe, S.
    Journal of Bacteriology, 2012, 194(5), 1169-1176.
  7. Human norovirus occurrence and diversity in the Llobregat river catchment, Spain
    Pérez-Sautu, U., Sano, D., Guix, S., Kasimir, G., Pintó, R. and Bosch, A.
    Environmental Microbiology, 2012, 14(2), 494-502.

International conference proceedings

  1. Development of a fluorescent molecular probe for heavy metal ion analysis in aquatic samples
    Satoh, H., Hafuka, A., Yamada, K., Takahashi, M., and Okabe, S.
    Invited Speaker
    The 2cd International Conference on Small Science (ICSS 2012)
    Orlando, USA.
    Dec. 12-16, 2012.
  2. Bacteriophage resistant mechanisms of mature Escherichia coli biofilms
    May, T., Tsuruta, K., and Okabe, S.
    Biofilms 5
    Paris, France.
    Dec. 10-12, 2012.
  3. Multiple peak expression of enteric virus density in environmental water
    Sano, D., Kato, T., Kobayashi, A., Miura, T. and Okabe, S.
    4th Asia-Pacific Young Water Professionals Conference 2012
    Miraikan, Tokyo, Japan.
    Dec. 8-9, 2012.
  4. Bacteroides-Prevotella genetic markers as fecal pollution indicators for microbiologically safe water management
    Kobayashi, A., Sano, D., Ishii, S. and Okabe, S.
    4th Asia-Pacific Young Water Professionals Conference 2012
    Miraikan, Tokyo, Japan.
    Dec. 8-9, 2012.
  5. Risk assessment for viral infection via drinking water considering age-dependent susceptibility
    Watanabe, T., Itoh, H., Sano, D., and Okabe, S.
    4th Asia-Pacific Young Water Professionals Conference 2012
    Miraikan, Tokyo, Japan.
    Dec. 8-9, 2012.
  6. Microbiologically safe water management in membrane-based wastewater reuse
    Sano, D. and Okabe, S.
    1st symposium on innovation of water monitoring system with rapid, highly precise and exhaustive pathogen detection technologies
    Sendai, Miyagi, Japan.
    Oct. 20, 2012.
  7. Detection, quantification and isolation of Escherichia coli O157 with flow cytometry and fluorescence-activated sorting
    Ozawa, S., Ishii, S. and Okabe, S.
    Japan and China Joint Symposium, Sustainable Sanitation and Environment and Human Health Risk Management
    Sapporo, Hokkaido, Japan.
    Oct. 15, 2012.
  8. Bacterial extracellular polymeric substances as a novel adsorbent for human norovirus
    Yoshimura, T., Sano, D., Suenaga, A., Miura, T. and Okabe, S.
    Japan and China Joint Symposium, Sustainable Sanitation and Environment and Human Health Risk Management
    Sapporo, Hokkaido, Japan.
    Oct. 15, 2012.
  9. Infectivity of gastroenteritis viruses analyzed by oxidative stress marker detection and RNase sensitivity test
    Sano, D., Miura, T., Tojo, K., Otani, M. and Okabe, S.
    3rd Food and Environmental Virology Conference
    Lisbon, Portugal
    Oct. 7-10, 2012.
  10. Enteric bacteria bearing histo-blood group antigen-like extracellular polymeric substances as environmental vehicles for human noroviruses
    Miura, T., Sano, D., Suenaga, A., Yoshimura, T., Nakagomi, T., Nakagomi, O. and Okabe, S.
    3rd Food and Environmental Virology Conference
    Lisbon, Portugal
    Oct. 7-10, 2012.
  11. N2O emission from a partial nitrification-anammox process
    Okabe, S.
    Keynote Speach
    IWA Nutrient Removal and Recovery 2012
    Harbin, P. R. China
    Sep. 23-25, 2012.
  12. Microsensor measurements of nitrous oxide and nitric oxide production rates in partial nitrification and anammox granule
    Lathnayake, L., Satoh, H., Takahashi, M., and Okabe, S..
    IWA Nutrient Removal and Recovery 2012
    Harbin, P. R. China
    Sep. 23-25, 2012.
  13. Elucidating the ecophysiology of an anammox bacterium, Candidatus ‘Brocadia sinica’, by metagenomic approach
    Oshiki, M., Shinyako, K., Satoh, H. and Okabe, S.
    Poster presentation
    IWA Nutrient Removal and Recovery 2012
    Harbin, P. R. China
    Sep. 23-25, 2012.
  14. FISH case study
    Okabe, S.
    IWA World Water Congress & Exhibition
    Busan, South Korea
    Sep. 16-21, 2012.
  15. Development of fluorescent molecular probes for analysis of heavy metal ions in aquatic samples
    Hafuka, A., Taniyama H., Yamada, K., Takahashi, M., Okabe, S., and Satoh, H.
    IWA World Water Congress & Exhibition
    Busan, South Korea
    Sep. 16-21, 2012.
  16. Physiological characteristics of marine anammox bacteria enriched from sea sediments, Hiroshima, Japan
    Awata, T., Kindaichi, T., Ozaki, N., Ohashi, A., Oshiki, M., and Okabe, S.
    Poster presentation
    ISME14
    Copenhagen, Denmark
    Aug. 19-24, 2012.
  17. Meta-genomic analysis for the elucidation of physiology of an anammox bacterium, Candidatus 'Brocadia sinica'
    Oshiki, M., Shinyako, K., Satoh, H. and Okabe, S.
    Poster presentation
    ISME14
    Copenhagen, Denmark
    Aug. 19-24, 2012.
  18. Reduction of folate synthesis represses biofilm formation by decreasing curli fimbriae synthesis in Escherichia coli
    Tashiro, Y. and Okabe, S.
    Poster presentation
    ISME14
    Copenhagen, Denmark
    Aug. 19-24, 2012.
  19. Cell density-dependent anaerobic ammonium oxidation (anammox) activity of Candidatus 'Brocadia sinica'
    Hiraizumi, H., Oshiki, M. and Okabe, S.
    Poster presentation
    ISME14
    Copenhagen, Denmark
    Aug. 19-24, 2012.
  20. Microsensor measurements of nitrous oxide and nitric oxide production rates in partial nitrification and Anammox granules.
    Lathnayake, L., Satoh, H., Takahashi, M., and Okabe, S
    Water and Environmental Technology Conference
    The University of Tokyo, Tokyo, Japan.
    Jun. 29-30, 2012.
  21. Effect of dissolved hydrogen removal on the stability of the anaerobic digestion process during the organic shock loads
    Bandara, W. M. K. R. T. W., Satoh, H., Sasakawa, M., Nakahara, Y., Takahashi, M., and Okabe, S
    Water and Environmental Technology Conference
    The University of Tokyo, Tokyo, Japan.
    Jun. 29-30, 2012.
  22. Human norovirus-binding enteric bacteria bearing histo-blood group antigen-like extracellular polymeric substances
    Sano, D.
    The 46th Joint Working Conference on Viral Diseases, US-Japan Cooperative Medical Science Program.
    Beppu, Oita, Japan.
    Jun. 19, 2012.
  23. Colanic acid production decreases bacterial attachment on membranes
    Yoshida, K., Tashiro, Y., May, T., and Okabe, S.
    Poster presentation
    ASM General Meeting
    San Francisco, USA.
    June 16-19, 2012.
  24. Transcriptome analysis of intestinal epithelial cells infected with poliovirus type 1
    Tazawa, M., Miura, T., Sano, D., and Okabe, S.
    Europic 2012.
    Saint Raphael, France.
    Jun. 3-7, 2012.
  25. Detection of enteropathogenic Escherichia coli O157 with flow cytometry
    Ozawa, S., Ishii, S., and Okabe, S.
    The 2nd Young Professors and Students Symposium of NSFC-JST Joint Resarch Program.
    Xi'an, P.R. China.
    Mar. 28th, 2012.
  26. Adsorption characterization of human norovirus particels to bacterial extracellular polymeric substances
    Yoshimura, T., Suenaga, A., Miura, T., Sano, D., and Okabe, S.
    The 2nd Young Professors and Students Symposium of NSFC-JST Joint Resarch Program.
    Xi'an, P.R. China.
    Mar. 28th, 2012.
  27. Calicivirus infectivity estimated by oxidative stress marker detection
    Otani, M., Sano, D., Miura, T., and Okabe, S.
    The 2nd Young Professors and Students Symposium of NSFC-JST Joint Resarch Program.
    Xi'an, P.R. China.
    Mar. 28th, 2012.
  28. Microbiologically safe water management in wastewater potable reuse
    Sano, D.
    The 2nd Young Professors and Students Symposium of NSFC-JST Joint Resarch Program.
    Xi'an, P.R. China.
    Mar. 28th, 2012.